seaview (1:2.2-1) unstable; urgency=low [ Nelson A. de Oliveira ] * Updated watch file. [ Charles Plessy ] * New upstream release: - introduced interface to external alignment programs. - Work with several alignment windows; copy and paste sequence data between them. * Moved the Homepage: field out from the package's description. * Removed the XS- prefix of the Vcs fields in debian/control * Building the manpage offline: added seaview.1 to the package, and removed xsltproc, docbook-xml and docbook-xsl from the build-dependencies. * Patches to Seaview: - Refreshed. - Suppressed xterm_to_x-terminal-emulator.patch : strange communication problems happen between seaview and some terminal emulators, such as gnome-terminal or konsole. - Hardcoded the path to seaview_align.sh. -- Charles Plessy Sun, 18 Nov 2007 23:35:29 +0900 seaview (1:2.0-1) unstable; urgency=low * New upstream release. Use "Props:View as proteins" to align protein-coding DNA sequences. -- Charles Plessy Fri, 24 Aug 2007 00:02:33 +0900 seaview (20070615-1) unstable; urgency=low * New upstream release correcting problems with lowercase characters. * Converted the SVN repository which hosts the Debian source package to use the MergeWithUpstream option. * Moved examples to debian/examples. * Using 'quilt' as a patch management system instead of 'dpatch'. * Managing all the changes to the sources whith quilt. * Adding $(misc-Depends) in debian/control. * Debian Menu transtion: moving entry to Applications/Science/Biology. * Manpage: automatic date update; upgrading revision number. * Adding bibliographic reference to debian/copyright and debian/control. * Dropping 'config.h' patch from .diff.gz. -- Charles Plessy Sat, 21 Jul 2007 12:43:23 +0900 seaview (20070417-1) unstable; urgency=low * New upstream release adding processing of comments in FASTA format. -- Charles Plessy Sun, 29 Apr 2007 22:51:23 +0900 seaview (20070215-1) unstable; urgency=low * New upstream release, adding a new "Edit sequence" option in the Edit menu. * Updated manpage and converted it to Unicode. * Add Subversion repository URL to debian/control. * Including /usr/share/dpatch/dpatch.make in debian/rules. -- Charles Plessy Thu, 5 Apr 2007 09:38:08 +0900 seaview (20061005-1) unstable; urgency=low * New upstream release. The xpm icon and its sources are now included in. * New maintainer email: the previous one was not the intended mailing list. * Removing options passed to x-terminal-emulator if they are not a MUST in the policy chapter 11.8.3. * Improved manpage. -- Charles Plessy Sat, 28 Oct 2006 17:27:02 +0900 seaview (20060918-1) unstable; urgency=low * New upstream release (Closes: #357585) * Uses muscle instead of clustalw, therefore moving to main (Closes: #357587) * Update debian/copyright: the current licence of seaview is GPL (Closes: #357581) * Conforms to Standards version 3.7.2 and debhelper compatibility level 5. * Collective maintainance: Debian-Med Packaging Team is the new Maintainer. * Outputs PS instead of PDF as Debian can not support the PDFlib. * Uses x-terminal-emulator instead of xterm. * Support for freedesktop menus, and nice new icon. * Updated manpage. -- Charles Plessy Thu, 28 Sep 2006 12:13:53 +0900 seaview (20021127-4.1) unstable; urgency=medium * Non-maintainer upload. * Medium-urgency upload for RC bugfix. * Rebuild for the C++ ABI transition. Closes: #328175. -- Steve Langasek Thu, 22 Sep 2005 02:07:07 -0700 seaview (20021127-4) unstable; urgency=low * Cleaned up debian/rules file. * Conforms to Standards version 3.6.1. -- Brian R Furry Sun, 30 Nov 2003 00:04:02 +0000 seaview (20021127-3) unstable; urgency=low * Adopted by new maintainer; closes: 100261 * Conforms to Standards version 3.6.0. -- Brian R Furry Thu, 11 Sep 2003 21:12:40 -0400 seaview (20021127-2.2) unstable; urgency=low * NMU. * Downgrade dependency on clustalw to a recommendation, since we don't absolutely need it and it doesn't exist on mips(el). -- Aaron M. Ucko Tue, 17 Jun 2003 13:22:55 -0400 seaview (20021127-2.1) unstable; urgency=low * NMU. * Rebuild with Xft2-based FLTK (>= 1.1.3-2.1). -- Aaron M. Ucko Wed, 7 May 2003 20:36:02 -0400 seaview (20021127-2) unstable; urgency=low * QA upload. * Built with g++ 3.2 and libfltk1.1c102 (closes: #176147). -- Colin Watson Sat, 11 Jan 2003 02:50:11 +0000 seaview (20021127-1) unstable; urgency=low * QA upload. * New upstream release. * Conforms to Standards version 3.5.8. -- Matej Vela Sun, 1 Dec 2002 22:14:33 +0100 seaview (20021010-1) unstable; urgency=low * QA upload. * New upstream release. * Provide a config.h for old_file_chooser.cxx. * debian/menu: Use `section=Apps/Science hints=Biology' (see #162812). -- Matej Vela Sat, 19 Oct 2002 21:26:13 +0200 seaview (20020409-1) unstable; urgency=low * QA upload. * New upstream version (there's no version number in the sources). Closes: #128357. * align.cxx: - Handle temporary files securely (seaview 0.0 is not vulnerable). - Use x-terminal-emulator rather than xterm or rxvt. * seaview.1: - List NEXUS among the supported formats. - `-reducefonts' is no longer accepted. * Switched to debhelper 4. * Moved /usr/lib/seaview/seaview.help to /usr/share/seaview as architecture-independent. * Changed section from contrib/misc to contrib/science. * Added menu support. * debian/changelog: Remove obsolete Emacs local variables. * Conforms to Standards version 3.5.7. -- Matej Vela Fri, 20 Sep 2002 18:25:47 +0200 seaview (0.0-6.1) unstable; urgency=low * NMU * Update to build against XForms 0.89. (closes: Bug#118138) -- Doug Porter Mon, 12 Nov 2001 11:43:51 -0500 seaview (0.0-6) unstable; urgency=low * Maintainer set to Debian QA Group . -- Adrian Bunk Fri, 24 Aug 2001 23:58:22 +0200 seaview (0.0-5) unstable; urgency=low * Adopted by new maintainer; closes: #92802 * Moved all doc files to /usr/share/doc; closes: #91647 * Moved manpage to /usr/share/man; closes: #91064 * Updated to latest policy, and added Build-Depends. * Removed some unnecessary files in debian dir. -- Dr. Guenter Bechly Sat, 7 Apr 2001 18:00:30 +0200 seaview (0.0-4) unstable; urgency=low * A few examples added * New bug in seaview_align.sh, this time fixed seriously. -- Stephane Bortzmeyer Thu, 3 Jun 1999 10:07:55 +0200 seaview (0.0-3) unstable; urgency=low * Big bug in seaview_align.sh (not all parameters were passed). -- Stephane Bortzmeyer Wed, 26 May 1999 14:39:26 +0200 seaview (0.0-2) unstable; urgency=low * No longer depends on c-shell or xterm. Closes #34700 * Manual page. Closes #34615 -- Stephane Bortzmeyer Tue, 25 May 1999 14:42:15 +0200 seaview (0.0-1) unstable; urgency=low * Initial Release. -- Stephane Bortzmeyer Mon, 1 Mar 1999 16:41:51 +0100