libpappsomspp (0.8.25-2) unstable; urgency=low * New upload with orig.tar.gz. The buster version by Olivier made dpkg think this was not a version needing orig.tar.gz. -- Filippo Rusconi Wed, 21 Apr 2021 22:21:44 +0200 libpappsomspp (0.8.25-1) unstable; urgency=low * New upstream version with new noise reduction features for the color maps. -- Filippo Rusconi Wed, 21 Apr 2021 15:59:49 +0200 libpappsomsp (0.8.25-1~buster+1) buster; urgency=medium * widgets to handle OBO terms -- Olivier Langella Wed, 21 Apr 2021 14:40:23 +0200 libpappsomspp (0.8.24-1) unstable; urgency=low * New upstream version. -- Filippo Rusconi Thu, 08 Apr 2021 09:54:26 +0200 libpappsomspp (0.8.23-1~buster+1) buster; urgency=medium * mass spectrum widget API modified to highlight precursor -- Olivier Langella Thu, 01 Apr 2021 14:24:04 +0200 libpappsomspp (0.8.23-1) unstable; urgency=low * The tests that failed in i386 could not be fixed for some reason. However, the software is working fine as tested in a VirtualBox environment of i386. The failing tests are conditionally dropped for i386. -- Filippo Rusconi Wed, 31 Mar 2021 14:28:43 +0200 libpappsomspp (0.8.22-1) unstable; urgency=low * Rewrite the Trace::containsX() function so that it passes the i386-based tests. All tests pass on an i386 VirtualBox-based testing Debian box. -- Filippo Rusconi Tue, 30 Mar 2021 10:18:36 +0200 libpappsomspp (0.8.21-1) unstable; urgency=low * Try to fix the build failures on i386 platforms due to double precision varying on 32 bits vs 64 bits platforms. -- Filippo Rusconi Mon, 29 Mar 2021 14:14:24 +0200 libpappsomspp (0.8.20-1) unstable; urgency=low * New upstream version with all the integration region selection reworked to cope with the specific case of integration skewed selection rectangle. * Add d/not-installed to list uninstalled files (those that are shipped as symbolic links). * Build-Depends: debhelper-compat (= 13). -- Filippo Rusconi Tue, 23 Mar 2021 17:01:09 +0100 libpappsomspp (0.8.19-1~buster+1) buster; urgency=medium * new test to control memory usage * no cache in mzcalibration timstof model * XIC shared pointer initialization in timstof reader -- Olivier Langella Wed, 03 Mar 2021 16:30:53 +0100 libpappsomspp (0.8.18-1) unstable; urgency=low * New upstream version (see below). * Fixed a bunch of QT DEPRECATED warnings. * Standards-Version: 4.5.1 (no changes needed). -- Filippo Rusconi Thu, 25 Feb 2021 06:21:37 +0100 libpappsomspp (0.8.17-1~buster+1) buster; urgency=medium * tandemrunwrapper memory leak problem fixed * first working version of a TimsTofPRO XIC extractor * new test for tandemrunwrapper, TimsTofPROT xic extraction -- Olivier Langella Tue, 23 Feb 2021 09:26:43 +0100 libpappsomspp (0.8.16-1~buster+2) buster; urgency=medium * TimsData reader performance enhancements * changing isotope natural abundance to use the massXpert definitions * DeepProt enumerations for controlled vocabulary across PAPPSO software * enabling test execution in debian package process -- Olivier Langella Thu, 28 Jan 2021 11:46:15 +0100 libpappsomspp (0.8.16-1~buster+1) buster; urgency=medium * development package -- Olivier Langella Fri, 22 Jan 2021 13:22:56 +0100 libpappsomspp (0.8.15-1) unstable; urgency=low * New upstream version depending on libodsstream 0.7.11. * Disable make test for the moment. -- Filippo Rusconi Mon, 21 Dec 2020 18:05:07 +0100 libpappsomspp (0.8.14-1~buster+1) buster; urgency=medium * catch2 test suite is working * fix for standard exception compatibility -- Olivier Langella Wed, 16 Dec 2020 14:00:13 +0100 libpappsomspp (0.8.13-1~buster+1) buster; urgency=medium * buster package -- Olivier Langella Wed, 09 Dec 2020 15:36:32 +0100 libpappsomspp (0.8.13-1) unstable; urgency=low * New upstream with improvement in the XIC widgets. -- Filippo Rusconi Tue, 08 Dec 2020 16:29:03 +0100 libpappsomspp (0.8.12-1) UNRELEASED; urgency=low * New upstream version with new tests imported from mineXpert2 (Catch2-based). * See below for changes between 0.8.8 and now. -- Filippo Rusconi Wed, 02 Dec 2020 14:28:10 +0100 libpappsomspp (0.8.11-1~buster+1) buster; urgency=medium * test added * bug fix in chargeDeconvolution filter * including catch2 framework -- Olivier Langella Tue, 24 Nov 2020 10:08:59 +0100 libpappsomspp (0.8.10-1~buster+1) buster; urgency=medium * better tandemrun wrapper * better FilterSuiteString -- Olivier Langella Wed, 18 Nov 2020 10:13:20 +0100 libpappsomspp (0.8.9-1~buster+1) buster; urgency=medium * rewritten TimsTOF mz calibration API * new FilterNameInterface to build Filter with strings * Thomas Renne added in the copyright debian notice -- Olivier Langella Tue, 17 Nov 2020 13:31:57 +0100 libpappsomspp (0.8.8-1~buster+1) buster; urgency=medium * autoremove directory created for tandem run wrapper -- Olivier Langella Mon, 02 Nov 2020 10:50:32 +0100 libpappsomspp (0.8.8-1) unstable; urgency=low * Add the possibility to recalculate the x,y,z axis scale to log10 or linear. -- Filippo Rusconi Wed, 21 Oct 2020 14:29:32 +0200 libpappsomspp (0.8.7-1~buster+1) buster; urgency=medium * make new builtin centroid interface available throught TimsMsRunReader * access to the underlying timdata pointer from TimsMsRunReader -- Olivier Langella Thu, 15 Oct 2020 09:14:24 +0200 libpappsomspp (0.8.6-1~buster+1) buster; urgency=medium * builtin centroid for timsdata -- Olivier Langella Wed, 14 Oct 2020 10:22:37 +0200 libpappsomspp (0.8.5-1~buster+1) buster; urgency=medium * more checks on file permissions for tandem run wrapper * charge deconvolution documented -- Olivier Langella Fri, 09 Oct 2020 15:37:09 +0200 libpappsomspp (0.8.4-1~buster+1) buster; urgency=medium * new charge deconvolution filter -- Olivier Langella Thu, 08 Oct 2020 10:52:40 +0200 libpappsomspp (0.8.3-1~buster+1) buster; urgency=medium * better msrunreader error messages * regorganised xic extractor to ensure that device is released -- Olivier Langella Mon, 05 Oct 2020 10:19:53 +0200 libpappsomspp (0.8.2-1) buster; urgency=low [ Filippo Rusconi ] * Fixes in the minus combiners. -- Filippo Rusconi Wed, 23 Sep 2020 15:22:50 +0200 libpappsomspp (0.8.2-1~buster+1) buster; urgency=medium * msrunreader new api to release/acquire file pointers -- Olivier Langella Fri, 25 Sep 2020 15:07:16 +0200 libpappsomspp (0.8.1-1) unstable; urgency=low * Fix bug due to not testing pointer against nullptr. -- Filippo Rusconi Mon, 21 Sep 2020 17:20:31 +0200 libpappsomspp (0.8.0-1) UNRELEASED; urgency=low * Add MSn support. -- Filippo Rusconi Mon, 21 Sep 2020 15:53:13 +0200 libpappsomspp (0.7.15-1) unstable; urgency=low * Attempt at fixing the test/test_massrange.cpp failure in i386 platforms. -- Filippo Rusconi Thu, 10 Sep 2020 18:07:48 +0200 libpappsomspp (0.7.14-1) unstable; urgency=low * Bug fix in DataPoint initialization using initialize(). -- Filippo Rusconi Wed, 02 Sep 2020 10:23:48 +0200 libpappsomspp (0.7.14-1~buster+1) buster; urgency=medium * new filters : FilterComplementIonEnhancer, FilterGreatestYperWindow, FilterRemoveC13 -- Olivier Langella Thu, 27 Aug 2020 10:36:53 +0200 libpappsomspp (0.7.13-1) unstable; urgency=low * Another set of fixes for the faulty hard-coded path to the arch-specific system library directory. -- Filippo Rusconi Tue, 25 Aug 2020 13:13:48 +0200 libpappsomspp (0.7.12-1) unstable; urgency=low * Add new filter. -- Filippo Rusconi Mon, 24 Aug 2020 19:42:19 +0200 libpappsomspp (0.7.11-1) unstable; urgency=low * Fix problem with the shipped CMake-based config module file that was replaced with a find module file that has no path hard-coded in it. This should fix the failed builds on all the non x86_64 platforms. -- Filippo Rusconi Mon, 24 Aug 2020 15:45:21 +0200 libpappsomspp (0.7.11-1~buster+1) buster; urgency=medium * fix MassSpectrumWidget issue #3 -- Olivier Langella Mon, 17 Aug 2020 15:52:06 +0200 libpappsomspp (0.7.10-1~buster+1) buster; urgency=medium * buster package -- Olivier Langella Wed, 22 Jul 2020 11:04:12 +0200 libpappsomspp (0.7.10-1) unstable; urgency=low * New upstream version. Added new widget class to represent mass data to a TIC|XIC chromatogram / drift spectrum color map as requested by a user. * Updates to the packaging. -- Filippo Rusconi Thu, 09 Jul 2020 09:26:14 +0200 libpappsomspp (0.7.9-1~buster+1) buster; urgency=medium * new version for debian buster pappsodev -- Olivier Langella Wed, 01 Jul 2020 18:49:18 +0200 libpappsomspp (0.7.8-1~buster+1) buster; urgency=medium * Debian buster backport -- Olivier Langella Wed, 10 Jun 2020 17:04:05 +0200 libpappsomspp (0.7.8-1) unstable; urgency=low * New upstream that has the src/custompwiz source directory removed. This lib now build-depends on another package: libpwizlite-dev. * d/copyright was updated to reflect the removal of the pwiz code subset. Note that 3 files were kept, modified and relocated to the pappsomspp source tree. These were documented in d/copyright. -- Filippo Rusconi Thu, 04 Jun 2020 18:21:53 +0200 libpappsomspp (0.7.7-2) buster; urgency=medium * packaging problem fixed -- Olivier Langella Tue, 19 May 2020 15:47:42 +0200 libpappsomspp (0.7.7-1) buster; urgency=medium * a lot of warnings fixed, better virtual destructors -- Olivier Langella Mon, 18 May 2020 10:31:35 +0200 libpappsomspp (0.7.6-1) UNRELEASED; urgency=low * Fixes for the CMake build system. -- Filippo Rusconi Tue, 28 Apr 2020 18:03:15 +0200 libpappsomspp (0.7.5-1) unstable; urgency=low * New upstream version with fixex for Qt5 suffix remnants within CMake stuff. Also, use better name for the libs in the CMake dialect (PAPPSOMSPP becomes PappsoMSpp). -- Filippo Rusconi Tue, 28 Apr 2020 16:35:52 +0200 libpappsomspp (0.7.4-1) unstable; urgency=low * New upstream version with MultiArch support. * General review of the packaging for Debian official repos upload. * Full copyright holders info in d/copyright. -- Filippo Rusconi Wed, 22 Apr 2020 10:14:26 +0200 libpappsomspp (0.7.3-2) buster; urgency=medium * no more global include directories in cmake to fix compilation problems -- Olivier Langella Mon, 20 Apr 2020 09:08:55 +0200 libpappsomspp (0.7.3-1) buster; urgency=medium * new system to export symbols for Windows system * filter pseudo centroid -- Olivier Langella Wed, 15 Apr 2020 08:02:58 +0200 libpappsomspp (0.7.2-3) buster; urgency=medium * important fix in timsframe polynomial resolution -- Olivier Langella Sun, 12 Apr 2020 16:57:34 +0200 libpappsomspp (0.7.2-2) buster; urgency=medium * fix pappsomsconfig generation and install -- Olivier Langella Fri, 10 Apr 2020 19:36:54 +0200 libpappsomspp (0.7.2-1) buster; urgency=medium * reworked cmake stuff -- Olivier Langella Fri, 10 Apr 2020 10:26:45 +0200 libpappsomspp (0.7.1-1) buster; urgency=medium * brand new library, including libpwiz to avoid compilation problems -- Olivier Langella Wed, 08 Apr 2020 18:26:53 +0200 libpappsomspp (0.7.0-1) unstable; urgency=low * New packaging for testing Debian sid package creation. -- Filippo Rusconi Sat, 18 Jan 2020 21:05:02 +0100 libpappsomspp (0.6.5-1ubuntu1) bionic; urgency=medium * ubuntu 18.04 package -- Olivier Langella Fri, 10 Jan 2020 21:59:22 +0000 libpappsomspp (0.6.5-1) buster; urgency=medium * catch pwiz runtime error * set scans number for mzXML files -- Olivier Langella Wed, 08 Jan 2020 20:50:05 +0100 libpappsomspp (0.6.4-1) buster; urgency=medium * a lot of development from Filippo Rusconi and Olivier Langella -- Olivier Langella Thu, 19 Dec 2019 21:55:55 +0100 libpappsomspp (0.6.3-2) buster; urgency=medium * buster package -- Olivier Langella Thu, 12 Sep 2019 15:23:58 +0200 libpappsomspp (0.6.3-1) stretch; urgency=medium * better BaseTracePlotWidget * new callback function to cancel msrunreader operation * new set of objects to handle Bruker's Tims TOF raw data natively * new MsRunReaders for Bruker's Tims TOF raw data (incomplete) -- Olivier Langella Wed, 11 Sep 2019 09:57:57 +0200 libpappsomspp (0.6.2-1) buster; urgency=medium * first buster package * new BaseTracePlotWidget designed by Filippo Rusconi * FastaFileIndexer object * new function hasScanNumbers to know if an MSrun file can be accessed using scan numbers (true with Thermo, false with others) * peptide palindrome test * new code to compute natural isotope average * new constructor Trace(const MapTrace &map_trace) to build directly a Trace from MapTrace -- Olivier Langella Tue, 16 Jul 2019 14:23:52 +0200 libpappsomspp (0.6.1-1) stretch; urgency=medium * huge refactoring with Filippo Rusconi * work in progress to define a tree structure and browse MS runs * new object and API to align MS runs using the MS2 method -- Olivier Langella Sat, 08 Jun 2019 19:29:09 +0200 libpappsomspp (0.6.0-1) stretch; urgency=medium * huge refactoring with Filippo Rusconi * all filters now available on a Trace object with a simple interface * peak detection as a new simple interface that can be used on any Trace * new feature to combine several traces or mass spectrum * mass spectrum scan numbers are deprecated in favor of a simple index of the scan * a new msfile accessor is available to handle multiple ms runs into a single file -- Olivier Langella Thu, 23 May 2019 11:00:11 +0200 libpappsomspp (0.5.1-1) stretch; urgency=medium * better packaging * mutation support -- Olivier Langella Sat, 23 Mar 2019 07:27:31 +0100 libpappsomspp (0.5.0-1) stretch; urgency=medium * library entirely refactored with Filippo Rusconi * better documentation * coding standards available -- Olivier Langella Wed, 06 Feb 2019 10:27:13 +0100 libpappsomspp (0.4.5-1) stretch; urgency=medium * new package with graphical bug fix -- Olivier Langella Tue, 08 Jan 2019 15:49:32 +0100 libpappsomspp (0.4.4-5) stretch; urgency=medium * new pwiz library -- Olivier Langella Wed, 02 Jan 2019 21:24:24 +0100 libpappsomspp (0.4.4-3) stretch; urgency=medium * new qcustomplot library 2.0.1 -- Olivier Langella Tue, 11 Dec 2018 19:07:06 +0100 libpappsomspp (0.4.4-1) unstable; urgency=low * Packaging for first upload to the NEW queue. -- Filippo Rusconi Tue, 11 Dec 2018 11:06:34 +0100 libpappsomspp (0.4.3-2) stretch; urgency=medium * fix MGF precursor scan num empty -- Olivier Langella Fri, 02 Nov 2018 13:44:50 +0100 libpappsomspp (0.4.3-1) stretch; urgency=medium * new buffered XIC reader based on pwiz library -- Olivier Langella Tue, 14 Aug 2018 14:27:31 +0200 libpappsomspp (0.4.2-1) stretch; urgency=medium * new API to read MSrun data -- Olivier Langella Sat, 02 Jun 2018 07:12:31 +0200 libpappsomspp (0.4.1-1) stretch; urgency=medium * new xic extractor based on slices and having a read buffer -- Olivier Langella Thu, 24 May 2018 19:24:13 +0200 libpappsomspp (0.4.0-2) stretch; urgency=medium * fix out of range problem -- Olivier Langella Thu, 17 May 2018 22:01:40 +0200 libpappsomspp (0.4.0-1) stretch; urgency=medium * new XIC extractor API and new dependency to proteowizard library -- Olivier Langella Wed, 16 May 2018 09:34:30 +0200 libpappsomspp (0.3.4-1) stretch; urgency=medium * API to draw peak borders -- Olivier Langella Sat, 14 Apr 2018 17:29:13 +0200 libpappsomspp (0.3.3-3) stretch; urgency=medium * fix cmake config module -- Olivier Langella Mon, 12 Feb 2018 09:13:16 +0100 libpappsomspp (0.3.3-2) stretch; urgency=medium * using new libodsstream package -- Olivier Langella Sun, 11 Feb 2018 16:54:30 +0100 libpappsomspp (0.3.3-1) stretch; urgency=medium * better widgets -- Olivier Langella Fri, 09 Feb 2018 15:57:58 +0100 libpappsomspp (0.3.2-1) stretch; urgency=medium * new XIC widget -- Olivier Langella Thu, 18 Jan 2018 15:54:09 +0100 libpappsomspp (0.3.1-1) stretch; urgency=medium * new precision widget, better spectrum widget -- Olivier Langella Wed, 10 Jan 2018 14:06:33 +0100 libpappsomspp (0.3.0-3) stretch; urgency=medium * avoid unneeded computations -- Olivier Langella Wed, 03 Jan 2018 09:10:46 +0100 libpappsomspp (0.3.0-2) stretch; urgency=medium * isotope number instead of level -- Olivier Langella Tue, 02 Jan 2018 17:00:11 +0100 libpappsomspp (0.3.0-1) stretch; urgency=medium * new PAPPSO widget package -- Olivier Langella Tue, 02 Jan 2018 10:48:10 +0100 libpappsomspp (0.2.40-1) stretch; urgency=medium * faster grouping algorithm, refactoring -- Olivier Langella Sun, 17 Dec 2017 14:05:18 +0100 libpappsomspp (0.2.39-1) stretch; urgency=medium * better perf in grouping algorithm -- Olivier Langella Fri, 15 Dec 2017 10:06:14 +0100 libpappsomspp (0.2.38-1) stretch; urgency=medium * centos7 compilation * fixed spectrum unique * better grouping performance -- Olivier Langella Sat, 21 Oct 2017 10:44:30 +0200 libpappsomspp (0.2.37-1) stretch; urgency=medium * new API for amino acid widlcards, new spectrum functions -- Olivier Langella Mon, 18 Sep 2017 10:29:48 +0200 libpappsomspp (0.2.36-1) stretch; urgency=medium * new peptide functions -- Olivier Langella Tue, 20 Jun 2017 21:53:35 +0200 libpappsomspp (0.2.35-1~stretch) stretch; urgency=medium * stretch pakage -- Olivier Langella Thu, 11 May 2017 15:02:25 +0200 libpappsomspp (0.2.35-1) jessie; urgency=medium * new grouping API -- Olivier Langella Wed, 26 Apr 2017 21:17:09 +0200 libpappsomspp (0.2.34-1) jessie; urgency=medium * new peptides API to handle modification removal -- Olivier Langella Mon, 24 Apr 2017 09:03:01 +0200 libpappsomspp (0.2.33-1~stretch) stretch; urgency=medium * stretch package -- Olivier Langella Tue, 18 Apr 2017 19:13:29 +0200 libpappsomspp (0.2.33-1) jessie; urgency=medium * better grouping, contaminant handler modified -- Olivier Langella Tue, 18 Apr 2017 11:17:20 +0200 libpappsomspp (0.2.32-3~stretch) stretch; urgency=medium * stretch package -- Olivier Langella Sat, 18 Mar 2017 13:50:48 +0100 libpappsomspp (0.2.32-3) jessie; urgency=medium * better intensity ratio isotope determination -- Olivier Langella Sat, 21 Jan 2017 12:13:24 +0100 libpappsomspp (0.2.32-2) stretch; urgency=medium * stretch package -- Olivier Langella Wed, 21 Dec 2016 21:43:27 +0100 libpappsomspp (0.2.32-1) jessie; urgency=medium * better spectrum API -- Olivier Langella Tue, 20 Dec 2016 17:01:04 +0100 libpappsomspp (0.2.31-2) stretch; urgency=medium * stretch package -- Olivier Langella Mon, 19 Dec 2016 18:45:14 +0100 libpappsomspp (0.2.31-1) jessie; urgency=medium * new modification replacer in digestion API -- Olivier Langella Wed, 07 Dec 2016 13:43:48 +0100 libpappsomspp (0.2.30-2) jessie; urgency=medium * digestion bug fixed -- Olivier Langella Mon, 14 Nov 2016 21:52:40 +0100 libpappsomspp (0.2.30-1) jessie; urgency=medium * new digestion API -- Olivier Langella Wed, 19 Oct 2016 21:50:47 +0200 libpappsomspp (0.2.29-1) jessie; urgency=medium * new peptide digestion pipeline -- Olivier Langella Tue, 13 Sep 2016 13:55:11 +0200 libpappsomspp (0.2.28-1) jessie; urgency=medium * don't handle xic sink pointer lifetime -- Olivier Langella Tue, 30 Aug 2016 17:12:30 +0200 libpappsomspp (0.2.27-1) jessie; urgency=medium * new ion types -- Olivier Langella Thu, 25 Aug 2016 07:48:16 +0200 libpappsomspp (0.2.26-1) jessie; urgency=medium * new features in xtandem hyperscore computations -- Olivier Langella Tue, 23 Aug 2016 10:06:12 +0200 libpappsomspp (0.2.25-1) jessie; urgency=medium * improving spectrum process for tandem hyperscore computation -- Olivier Langella Fri, 19 Aug 2016 10:54:19 +0200 libpappsomspp (0.2.24-1) jessie; urgency=medium * new API to digest protein, new documentation -- Olivier Langella Fri, 15 Jul 2016 16:01:40 +0200 libpappsomspp (0.2.23-1) jessie; urgency=medium * formula one -- Olivier Langella Sun, 03 Jul 2016 23:20:42 +0200 libpappsomspp (0.2.22-1) jessie; urgency=medium * XML id added in msrun -- Olivier Langella Sat, 25 Jun 2016 17:34:19 +0200 libpappsomspp (0.2.21-1) jessie; urgency=medium * computing PSI OBO modification masses using the diff formula -- Olivier Langella Fri, 24 Jun 2016 21:53:34 +0200 libpappsomspp (0.2.20-1) jessie; urgency=medium * compute amino acid mass using the chemical formula -- Olivier Langella Wed, 22 Jun 2016 21:47:53 +0200 libpappsomspp (0.2.19-1) jessie; urgency=medium * proton vs protium bug fixed -- Olivier Langella Wed, 22 Jun 2016 16:25:05 +0200 libpappsomspp (0.2.18-1) jessie; urgency=medium * disctinction between proton and protium mass -- Olivier Langella Wed, 22 Jun 2016 15:34:14 +0200 libpappsomspp (0.2.17-1) jessie; urgency=medium * amino acid precision goes now to 4 digits instead of previous 3 digits -- Olivier Langella Wed, 22 Jun 2016 13:48:34 +0200 libpappsomspp (0.2.16-1) jessie; urgency=medium * new syntax to limit modifications per site -- Olivier Langella Sun, 12 Jun 2016 08:12:44 +0200 libpappsomspp (0.2.15-1) jessie; urgency=medium * new API to build peptide modification pipeline from strings -- Olivier Langella Sat, 11 Jun 2016 22:15:09 +0200 libpappsomspp (0.2.14-1) jessie; urgency=medium * final fix into massrange -- Olivier Langella Fri, 20 May 2016 22:31:50 +0200 libpappsomspp (0.2.13-1) jessie; urgency=medium * bug fix on PAPPSO mass range build with upper and lower precision -- Olivier Langella Wed, 18 May 2016 15:25:20 +0200 libpappsomspp (0.2.12-1) jessie; urgency=medium * construct MassRange with upper and lower precisions -- Olivier Langella Mon, 02 May 2016 16:40:31 +0200 libpappsomspp (0.2.11-1) jessie; urgency=medium * get highest and lowest mass of MassRange -- Olivier Langella Thu, 28 Apr 2016 15:14:20 +0200 libpappsomspp (0.2.10-1) jessie; urgency=medium * peptide modification API modified, new Xic MS point distance function added -- Olivier Langella Sat, 09 Apr 2016 22:52:33 +0200 libpappsomspp (0.2.9-1) jessie; urgency=medium * copy constructor bug fixed in Xic isotope -- Olivier Langella Thu, 17 Mar 2016 08:46:10 +0100 libpappsomspp (0.2.8-2) jessie; urgency=medium * copy constructor added -- Olivier Langella Mon, 14 Mar 2016 21:18:37 +0100 libpappsomspp (0.2.8-1) jessie; urgency=medium * Precision pointers, xic detection methods -- Olivier Langella Thu, 10 Mar 2016 12:13:15 +0100 libpappsomspp (0.2.7-1) jessie; urgency=medium * combinations cached * parsing PSI MOD istope labels * semi tryptic digestion -- Olivier Langella Mon, 08 Feb 2016 09:06:57 +0100 libpappsomspp (0.2.6-2) jessie; urgency=medium * unneeded move constructor removed -- Olivier Langella Mon, 14 Dec 2015 22:26:54 +0100 libpappsomspp (0.2.6-1) jessie; urgency=medium * get ion list -- Olivier Langella Sat, 28 Nov 2015 23:05:36 +0100 libpappsomspp (0.2.5-2) jessie; urgency=medium * make shared pointer on ion fragment list -- Olivier Langella Sat, 28 Nov 2015 08:41:47 +0100 libpappsomspp (0.2.5-1) jessie; urgency=medium * new peptide functions -- Olivier Langella Sat, 21 Nov 2015 15:08:43 +0100 libpappsomspp (0.2.4-2) jessie; urgency=medium * symbols update -- Olivier Langella Sat, 07 Nov 2015 21:15:46 +0100 libpappsomspp (0.2.4-1) jessie; urgency=medium * better protein API -- Olivier Langella Sat, 07 Nov 2015 15:29:19 +0100 libpappsomspp (0.2.3-1) jessie; urgency=medium * avoid resource name conflicts -- Olivier Langella Fri, 23 Oct 2015 15:37:53 +0200 libpappsomspp (0.2.2-2) jessie; urgency=medium * U amino acid taken into account -- Olivier Langella Fri, 23 Oct 2015 13:08:17 +0200 libpappsomspp (0.2.2-1) jessie; urgency=medium * XIC detection API -- Olivier Langella Fri, 16 Oct 2015 14:12:09 +0200 libpappsomspp (0.2.0-2) jessie; urgency=medium * new peptide and spectrum API -- Olivier Langella Sat, 03 Oct 2015 23:17:10 +0200 libpappsomspp (0.2.0-1) jessie; urgency=medium * new API to digest and modify peptides -- Olivier Langella Wed, 30 Sep 2015 10:03:45 +0200 libpappsomspp (0.1.0-2) jessie; urgency=medium * better API to handle phospho loss -- Olivier Langella Mon, 14 Sep 2015 19:34:50 +0200 libpappsomspp (0.1.0-1) jessie; urgency=medium * better MS fragment ion support -- Olivier Langella Thu, 10 Sep 2015 22:32:02 +0200 libpappsomspp (0.0.4-3) jessie; urgency=medium * get PSI MOD name -- Olivier Langella Fri, 04 Sep 2015 17:09:35 +0200 libpappsomspp (0.0.4-2) jessie; urgency=medium * new getter to access obo term list -- Olivier Langella Fri, 04 Sep 2015 16:26:52 +0200 libpappsomspp (0.0.4-1) jessie; urgency=medium * new peptide parser using aa modifications -- Olivier Langella Thu, 03 Sep 2015 14:29:53 +0200 libpappsomspp (0.0.3-3) jessie; urgency=medium * library informations added in debian package (symbols, shlibs) -- Olivier Langella Wed, 19 Aug 2015 22:56:54 +0200 libpappsomspp (0.0.3-2) jessie; urgency=medium * little fix -- Olivier Langella Wed, 19 Aug 2015 16:38:26 +0200 libpappsomspp (0.0.3-1) jessie; urgency=medium * grouping functions OK -- Olivier Langella Tue, 18 Aug 2015 10:53:35 +0200 libpappsomspp (0.0.2-1) jessie; urgency=medium * first good package... I hope -- Olivier Langella Fri, 12 Jun 2015 08:58:19 +0200 libpappsomspp (0.0.1-5) jessie; urgency=medium * fix package concurency problem -- Olivier Langella Thu, 11 Jun 2015 15:26:37 +0200 libpappsomspp (0.0.1-4) jessie; urgency=medium * double Debian package for Qt4 and Qt5 -- Olivier Langella Thu, 11 Jun 2015 15:18:33 +0200 libpappsomspp (0.0.1-3) jessie; urgency=medium * cmake module added to dev package -- Olivier Langella Fri, 29 May 2015 16:08:52 +0200 libpappsomspp (0.0.1-2) jessie; urgency=medium * first Debian Jessie package -- Olivier Langella Fri, 29 May 2015 15:09:46 +0200 libpappsomspp (0.0.1-1) wheezy; urgency=low * first debian package -- Olivier Langella Mon, 16 Mar 2015 14:06:18 +0100