htsjdk (2.16.1+dfsg-3) unstable; urgency=medium * Fix FTBS on debian test servers due to ip/name resolution Remove related test. Closes: #913839 -- Olivier Sallou Fri, 16 Nov 2018 11:06:41 +0000 htsjdk (2.16.1+dfsg-2) unstable; urgency=medium * Fix FTBS with OpenJDK 11 (Closes: #913566) -- Olivier Sallou Mon, 12 Nov 2018 15:38:32 +0000 htsjdk (2.16.1+dfsg-1) unstable; urgency=medium [ Andreas Tille ] * New upstream version * debhelper 11 * Standards-Version: 4.2.1 * Skip test requiring http connection * d/rules: Respect DEB_BUILD_OPTIONS in override_dh_auto_test [ Olivier Sallou ] * Skip test requiring ftp connection -- Andreas Tille Wed, 19 Sep 2018 08:11:13 +0200 htsjdk (2.14.3+dfsg-3) unstable; urgency=medium * Reintroduce unit tests after jcommander fix -- Olivier Sallou Mon, 06 Aug 2018 07:03:33 +0000 htsjdk (2.14.3+dfsg-2) unstable; urgency=medium * Upload to unstable * Bumped versioned Build-Depends on default-jdk -- Andreas Tille Thu, 24 May 2018 07:53:54 +0200 htsjdk (2.14.3+dfsg-1) experimental; urgency=medium [ Andreas Tille ] * New upstream version Closes: #894289 * cme fix dpkg-control * Standards-Version: 4.1.4 * Point Vcs-fields to salsa.d.o * Update d/copyright * d/rules: fix get-poms target * Use 2to3 to convert Python script to Python3 [ Olivier Sallou ] * d/patches/30-disable-scalatest.patch Disable scala testing as scalatest is not available in Debian yet * d/rules * Fix JDK9 with --add-modules java.xml.bind in javadoc generation * Fix javadoc generation [TODO - O. Sallou in progress] * Reintroduce unit tests now that gradle 3.4 is available in sid - [done] new patch added for latest upstream, referencing junit classes - [done] added testng() call in build.gradle with a patch and set test call in d/rules back - testng fails now with jcommander classnotfound exception, this is a testng bug (#895886: testng: jcommander classes not found), wait to be fixed to enable tests in d/rules -- Andreas Tille Tue, 17 Apr 2018 15:14:40 +0200 htsjdk (2.8.1+dfsg-2) unstable; urgency=medium * d/patches/50-fix-build.patch, d/rules: fix testng declaration and disable unit testing due to gradle bug that will be fixed by gradle 3.4 => lower severity of #877590 -- Olivier Sallou Wed, 01 Nov 2017 09:25:25 +0000 htsjdk (2.8.1+dfsg-1) unstable; urgency=medium [ Andreas Tille ] * New upstream version Closes: #847736 * debhelper 10 * d/watch: version=4 [ Vincent Danjean ] * Add junit4 to Build-Depends -- Andreas Tille Sun, 18 Dec 2016 12:40:37 +0100 htsjdk (2.7.0+dfsg-2) unstable; urgency=medium * Fix mess in this changelog (the previous upload is missing the 2.6.1+dfsg-1 entry) -- Vincent Danjean Sun, 27 Nov 2016 21:14:49 +0100 htsjdk (2.7.0+dfsg-1) unstable; urgency=medium * New upstream version -- Vincent Danjean Wed, 16 Nov 2016 21:16:10 +0100 htsjdk (2.6.1+dfsg-1) unstable; urgency=medium * New upstream version -- Andreas Tille Sat, 10 Sep 2016 08:10:12 +0200 htsjdk (2.5.0+dfsg.2-2) unstable; urgency=medium [ Vincent Danjean ] * Tweak build-dependencies [ Andreas Tille ] * Remove some more tests needing http or ftp connections Closes: #830298 -- Andreas Tille Sun, 10 Jul 2016 19:11:39 +0200 htsjdk (2.5.0+dfsg.2-1) unstable; urgency=medium [ Andreas Tille ] * New upstream version * Take over change from debian/jessie-backports branch to successfully obtain JAVA_HOME * Bump Standards-Version to 3.9.8 * Simplified watch file [ Vincent Danjean ] * Skip tests checking the use of the local zip implementation * Adaptation to the new gradle build system * Rework debian/copyright (new source layout) * Add a maven2 pom file for htsjdk -- Vincent Danjean Thu, 07 Jul 2016 00:12:44 +0200 htsjdk (2.1.1+dfsg.1-1) unstable; urgency=medium [ Andreas Tille ] * Make sure repackaged tarball is compressed with xz [ Vincent Danjean ] * New upstream version * Bump Standard-Version to 3.9.7 * Switch back to default-jdk now that it is >= 1.8 -- Vincent Danjean Mon, 14 Mar 2016 22:13:50 +0100 htsjdk (2.0.1+dfsg.1-1) unstable; urgency=medium * New upstream version * remove network tests (Closes: #808593) -- Andreas Tille Mon, 15 Feb 2016 08:28:50 +0100 htsjdk (1.138+dfsg.1-4) unstable; urgency=medium * rename (again) the source package, as htsjdk (1.138+dfsg.1-2) passed the NEW queue. Both name (htsjdk and libhtsjdk-java) are acceptable, so continuing with the one accepted by the FTP team. -- Vincent Danjean Sat, 19 Dec 2015 21:30:58 +0100 libhtsjdk-java (1.138+dfsg.1-3) unstable; urgency=medium * Dump minor debian version part. Even if htsjdk source packages have been rejected from tyhe NEW queue as requested by ftpmaster, the binary packages have been registered and a conflict occured: "libhtsjdk-java_1.138+dfsg.1-1_all.deb: Does not match binary in database." * Really Closes: #798201 -- Vincent Danjean Mon, 07 Sep 2015 12:23:11 +0200 libhtsjdk-java (1.138+dfsg.1-1) unstable; urgency=medium * as Andreas Tille suggestions: + removed Shaun Jackman from Uploaders (can be added back if required) + rename source package from htsjdk to libhtsjdk-java (Closes: #798201) + fix a typo in README.Debian -- Vincent Danjean Mon, 07 Sep 2015 10:10:37 +0200 htsjdk (1.138+dfsg.1-2) unstable; urgency=medium * Fix version in MANIFEST -- Vincent Danjean Mon, 07 Sep 2015 01:31:14 +0200 htsjdk (1.138+dfsg.1-1) unstable; urgency=medium * Upstream split from picard-tools * Initial release. Closes: #798201. -- Vincent Danjean Sun, 06 Sep 2015 01:06:42 +0200